PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682242.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 351aa    MW: 39596 Da    PI: 7.8091
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF78.54.8e-25953145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    kr e++snrqvt+skRrngilKKA+ELS+LCd+e+a+++fs+tg+
  XP_021682242.1  9 KRLESTSNRQVTYSKRRNGILKKAKELSILCDIEIALLMFSPTGR 53
                    689****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MGRVKLKIKR LESTSNRQVT YSKRRNGILK KAKELSILCD IEIALLMFSP TGRPTLFQGE  60
HRSIEDVIAK FAQLTPQERA KRKLESLEAL RKTFKKLDHD VNVPDFLGAR TQTVEELSDQ  120
VRLLQAQLTE IQNRMSYWSN PGKVDSIEHL SQMEDSLKES IIQIRLQKEN FGMCQLMPLE  180
CNSQFQNGMA LPLMMNGMQK AQPLSWLPNN GNQHLILSNE QNISPQRDIE CSTSASLPGY  240
SGYYDTDKHV EIGIPGALDN PGRDGGALSN LSNNTCLGVQ VNEQFSCPPF SSLNLPEVRK  300
MKPEMQMNSQ GSNYVYQVNS NFELPRPIHN NVHHTWISAS GSCSIATFNE N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.11e-108M-type_MADS family protein