PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021682353.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 337aa MW: 37178.6 Da PI: 7.7564

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021682353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	1e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+ +W + +++ g++R++k+c++rw++yl XP_021682353.1 14 KGPWSPEEDAKLKEYIEKHGTVgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79****************879**********************97 PP
2	Myb_DNA-binding	36.8	8.8e-12	70	111	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++ +Ed ++ ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_021682353.1 70 GFSDDEDRIICRLYANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 699***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE KHGTVGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIRHGG FSDDEDRIIC RLYANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGM 120 MIHPSPAKLP HQLATSFSSF LHQASSSPIT AISSSPSSSY TLARSFTETI PFSSPLSNHN 180 NNNHNNSFTA TATTPILQPQ ESSFVAAALQ NYQMKDSSSL LMFGGETSCS SSDGSCNNQI 240 SHVKEIEYEY GAGSGGANTT EQMGFQSYFY NGVEESQKLL GGGGGGGWGE KQNGLWGENP 300 IIDYGLEEIK QLISTSSCSN NFLFEESKTT EERVMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-77	MYB family protein