PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682496.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 307aa    MW: 34658 Da    PI: 9.9216
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.66.8e-092973446
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     WT+ E +++ +a + + ++   +W+++a++++ g+t  +++ +++ 
   XP_021682496.1 29 WTPAENKIFENALAVYDKDtpdRWHRVAAMLP-GKTVGDVIKHYRE 73
                     ********************************.***********96 PP
2Myb_DNA-binding48.22.5e-15135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_021682496.1 135 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 179
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MKWEMEVLSP ASYHSSTNWL IEDSKSTIWT PAENKIFENA LAVYDKDTPD RWHRVAAMLP  60
GKTVGDVIKH YRELEVDISN IEAGLIPIPG YRTSPFTLDW SSSNSYDGFK QSYVLGGKRS  120
SSGRPADQER KKGVPWTEEE HKLFLMGLKK YGKGDWRNIS RNFVVTRTPT QVASHAQKYF  180
IRQLSGGKDK RRASIHDITT VNINDIRTPP DSKRPLSPDQ STTVLSQQSN AVAMPRTHFQ  240
WNQPNIGATM AFSATHGNMF MSSSYGINSY GLKMQAHNLH RGAVHESYIG PQSIAFQMQS  300
AQHYPHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-109MYB_related family protein