PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021682634.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 405aa MW: 44048.9 Da PI: 9.0388

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021682634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.6e-05	168	190	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg++F+ ++L+ H+++ H XP_021682634.1 168 TCSQCGEVFPKTESLELHQKVrH 190 8*******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MALLTFLPEH SEQGQQPSNR KRKLQKQKQK QKQPSSWDQI KNLLTCKQIE GSSVHDPSKN 60 LNGYSKLGSS CSYICSFRDV VHGNTRVVHR ADNSPESSTV GQETGLVSRK AVNGSSTRSL 120 GSSGRSKAGA THNSSSRGMQ FRKLSGCYEC HMIVDPSRYP SPRTTICTCS QCGEVFPKTE 180 SLELHQKVRH AVSELGPDDS GRNIVEIIFK SSWLKKDNSI CKIERILKVH NTQRTIQRFE 240 DCRDVVKTRA LNSTKKNPRC AADGNELLRF HCTNLTCALG AGGSSNLCGS IPGCGVCTTI 300 RHGFQGKECK GVRTTASSGM AHDSLIGCTD GRRAMLVCRV IAGRVKRVAE DAPPPEEDTA 360 ASAGGGSYDS VAGCAGIYSN LEELFVFNPR AILPCFVVIY SVLES

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MALLTFLPEH SEQGQQPSNR KRKLQKQKQK QKQPSSWDQI KNLLTCKQIE GSSVHDPSKN  60
LNGYSKLGSS CSYICSFRDV VHGNTRVVHR ADNSPESSTV GQETGLVSRK AVNGSSTRSL  120
GSSGRSKAGA THNSSSRGMQ FRKLSGCYEC HMIVDPSRYP SPRTTICTCS QCGEVFPKTE  180
SLELHQKVRH AVSELGPDDS GRNIVEIIFK SSWLKKDNSI CKIERILKVH NTQRTIQRFE  240
DCRDVVKTRA LNSTKKNPRC AADGNELLRF HCTNLTCALG AGGSSNLCGS IPGCGVCTTI  300
RHGFQGKECK GVRTTASSGM AHDSLIGCTD GRRAMLVCRV IAGRVKRVAE DAPPPEEDTA  360
ASAGGGSYDS VAGCAGIYSN LEELFVFNPR AILPCFVVIY SVLES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-175	C2H2 family protein