PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021682654.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 677aa MW: 75766.1 Da PI: 6.7739

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021682654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	325	384	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021682654.1 325 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 384 78*****************988886678446***********************98 PP
2	AP2	46.4	9.8e-15	427	478	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_021682654.1 427 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 478 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MKSMNNDDQD NNNTNWLGFS LSPHMKMEVP SGVNHHHQAQ SASASVPTAI SASLFHSQPH 60 SNLNYCNLFD VEGDNGGFSP LPAMPLKSDG SLCIMEALTR SQLKATMVTS STPKLEDFFG 120 GATMGTHQYE TNDREAMPLS LDSMYYHQDP EHQPNDQNYL NHLQQNPNRH QQHHQIQVEH 180 YPYYNTNFRS YEMLVGEEPK ETQQVSDCNL QLPTIGDDEI KRMRNWVSRN YPSNPAMDQQ 240 KMISCMGENG GESGAISAMA YGDLQSLSLS MSPGSQSSCV TGSQQISPAV TDCAAMETKK 300 RGPDKVDQKQ IVHRKSIDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQSRKGRQV 360 YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQKEL EEMKNMTRQE YVAHLRRKSS 420 GFSRGASIYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD IAAIKFRGVN 480 AVTNFDITRY DVERIMASNT LLAAELARRN KDTGSGNEAT NHNPPTLNSI GEAIPSQKNN 540 ESEPDWKMVL YQSSQQQLDQ KATNAIDNYK TQVFPLTPEN MTGIDAMSSV HQQEVEDSTK 600 MGTHLSNASS LVTSLSSSRE GSPDRASLPM LFAIPPSATS KLFTNPTNNV NSWITTAQLR 660 PAVTLPHLPV FASWTDA

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MKSMNNDDQD NNNTNWLGFS LSPHMKMEVP SGVNHHHQAQ SASASVPTAI SASLFHSQPH  60
SNLNYCNLFD VEGDNGGFSP LPAMPLKSDG SLCIMEALTR SQLKATMVTS STPKLEDFFG  120
GATMGTHQYE TNDREAMPLS LDSMYYHQDP EHQPNDQNYL NHLQQNPNRH QQHHQIQVEH  180
YPYYNTNFRS YEMLVGEEPK ETQQVSDCNL QLPTIGDDEI KRMRNWVSRN YPSNPAMDQQ  240
KMISCMGENG GESGAISAMA YGDLQSLSLS MSPGSQSSCV TGSQQISPAV TDCAAMETKK  300
RGPDKVDQKQ IVHRKSIDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQSRKGRQV  360
YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQKEL EEMKNMTRQE YVAHLRRKSS  420
GFSRGASIYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD IAAIKFRGVN  480
AVTNFDITRY DVERIMASNT LLAAELARRN KDTGSGNEAT NHNPPTLNSI GEAIPSQKNN  540
ESEPDWKMVL YQSSQQQLDQ KATNAIDNYK TQVFPLTPEN MTGIDAMSSV HQQEVEDSTK  600
MGTHLSNASS LVTSLSSSRE GSPDRASLPM LFAIPPSATS KLFTNPTNNV NSWITTAQLR  660
PAVTLPHLPV FASWTDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-152	AP2 family protein