PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682788.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 26204.7 Da    PI: 9.3052
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.87.7e-301160150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+ey 
  XP_021682788.1 11 KRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYV 60
                    79***********************************************7 PP
2K-box87.32.9e-2973171199
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yqk+ g++ ++ ++e++++ l++Lk+ + nL+re+R+++Ge+L++Ls+++L+ Leq+++++l+ iR++Kn+++ +qi +  kk ++++e+ ++L 
  XP_021682788.1  73 YQKTLGVDIWSPQYEKMNETLKRLKEVNGNLRREIRQRMGECLNDLSFENLRGLEQDMDTALNLIRERKNRVIANQIVTWNKKLRNAEERYRNLL 167
                     78999999**************************************************************************************9 PP

           K-box  96 kkle 99 
                     ++le
  XP_021682788.1 168 HELE 171
                     9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MGMARGKIQI KRIENSTNRQ VTYSKRRNGL FKKANELTVL CDAKVSIIMF SSTGKLHEYV  60
SPSTSTKQMF DQYQKTLGVD IWSPQYEKMN ETLKRLKEVN GNLRREIRQR MGECLNDLSF  120
ENLRGLEQDM DTALNLIRER KNRVIANQIV TWNKKLRNAE ERYRNLLHEL EARDHEDPHY  180
GLVDNGSVFG FENEDPSSIF VLRLQSNHPN LHSGAGSDLS TYPLLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.13e-90MIKC_MADS family protein