PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682930.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 543aa    MW: 61128.2 Da    PI: 5.9176
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS394.89e-1211745432374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++L++cA+ vs+gd ++a  l+  l++++s +g+pmqRl ay++e+L+ar+  s+s++y+al++ +     ss+ ++++ ++++++P+ +f++ 
  XP_021682930.1 174 KQVLFACAQSVSDGDIQRAAGLMHVLEQMVSVSGEPMQRLGAYMLEGLRARVELSGSKIYRALKCDAPL---SSDLMTYMGILFKICPYWRFAYT 265
                     789****************************************************************98...9999999**************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN  I ea+  e r+HiiDf+i qG+QW+ L+++La+Rp+gpps+RiTgv++p+s   +   l  +g++L+ fAe+++vpfef   +a +  ++
  XP_021682930.1 266 AANVVIREAMVYEPRIHIIDFQIAQGTQWMYLIKSLADRPGGPPSIRITGVDDPQSAhaRGGGLPIVGHKLSCFAESCNVPFEFYD-AAMSGCEV 359
                     *******************************************************99888999**********************9.89999*** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +le+L ++pgEa++Vn+ + lh+++desv++ ++rd++L+lvkslsPkvv+++eqe+++n+++Fl rf  +leyy+a+f+s++a+ +r++++ri+
  XP_021682930.1 360 QLEHLGLQPGEAVVVNFPYVLHHMPDESVNTWNHRDRLLRLVKSLSPKVVTLIEQESNTNTKPFLPRFKATLEYYAAMFESIDAGSSRDDKQRIN 454
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      E+++++r+ivn++acega+r+erhe ++kW+ r+++aGF+++pl++ ++  ++ llr+++ + y ++e++g+l+l W + p+ ++SaWr
  XP_021682930.1 455 AEQHCVARDIVNMIACEGADRVERHELFGKWSLRFNMAGFTQYPLTSMVTGAVRDLLREYD-RNYGLQEKDGALYLWWINTPMATFSAWR 543
                     *************************************************************.55*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MQTSQKHKSS AGIHGFYHQP QEIDQYGLPH IQILDNNVFS DVGNQGTTVS FQNYKDEYFT  60
LESSTATGGF VVYDSPAASV SSNRSPFSPQ GSHSYLSDPH HSPDNIYGSP MSGSSSADDD  120
NLLMRQKLRE LEFLLLGSES DITKNCDFCF HQADRLASWD WNQMVEMIPR LDIKQVLFAC  180
AQSVSDGDIQ RAAGLMHVLE QMVSVSGEPM QRLGAYMLEG LRARVELSGS KIYRALKCDA  240
PLSSDLMTYM GILFKICPYW RFAYTAANVV IREAMVYEPR IHIIDFQIAQ GTQWMYLIKS  300
LADRPGGPPS IRITGVDDPQ SAHARGGGLP IVGHKLSCFA ESCNVPFEFY DAAMSGCEVQ  360
LEHLGLQPGE AVVVNFPYVL HHMPDESVNT WNHRDRLLRL VKSLSPKVVT LIEQESNTNT  420
KPFLPRFKAT LEYYAAMFES IDAGSSRDDK QRINAEQHCV ARDIVNMIAC EGADRVERHE  480
LFGKWSLRFN MAGFTQYPLT SMVTGAVRDL LREYDRNYGL QEKDGALYLW WINTPMATFS  540
AWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein