PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683003.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 363aa MW: 40976.6 Da PI: 5.6736

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.4	4e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl XP_021683003.1 14 KGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.5	1.1e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_021683003.1 67 RGRFSFEEEETIIQLHGILGNK-WSAIASRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGRVPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHGILGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDISSILG SSLYNSSQMN ISRLLGVQPM VNRELLRLAT SIISSQRQNQ 180 NFVSQNGQEN QLCNLSAQNQ YHPIVQASEF QSQVPEMPTC TTLTTPFVPF SNETQLMDPS 240 ITDLSSQDSQ LNHQEWQSDT GMASNLADYM TTVPSYNDYY GSDQTAIMDP SSETTSTFIS 300 NNGNQQNFSF ASVLSTPSSS STPLNSNSTY INGSSSTEDE RESYCSNMLK FEIPDSLDVS 360 NFM

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGRVPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHGILGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDISSILG SSLYNSSQMN ISRLLGVQPM VNRELLRLAT SIISSQRQNQ  180
NFVSQNGQEN QLCNLSAQNQ YHPIVQASEF QSQVPEMPTC TTLTTPFVPF SNETQLMDPS  240
ITDLSSQDSQ LNHQEWQSDT GMASNLADYM TTVPSYNDYY GSDQTAIMDP SSETTSTFIS  300
NNGNQQNFSF ASVLSTPSSS STPLNSNSTY INGSSSTEDE RESYCSNMLK FEIPDSLDVS  360
NFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-112	MYB family protein