PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683399.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 413aa MW: 47417.4 Da PI: 6.2448

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.3	2.8e-18	86	165	13	98
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++l +p +f+++ k+ ++ +tl+ +sg +W+v l + +++++++ GW+eFv+++ L+e+D ++Fk++g+s+f v +f+ XP_021683399.1 86 RRQLPIPEHFTKNLR--KKLPQVMTLRGPSGLTWQVVL--TTNDDTMFFNHGWEEFVNDHFLQEKDLLIFKYNGDSCF--DVLIFD 165 34699***96655..448889***********..9***********************************..888887 PP
2	B3	47.6	3e-15	311	392	1	84
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f v++p +v ++ +++p ++++ ++ e+++++l++ + ++W k+ y+k++++ l++GWk+F+ an+L+e D++vF+ XP_021683399.1 311 FMVVMKPTHVYRRFYMSIPSAWTSKNlrSL---EKQDVILRT-KENTWHTKFYYQKSKNSGGLSSGWKSFALANDLQEFDVCVFEP 392 77899****************9996433...344788776.899**9999999999********************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MQKIIVGRNG DGTNSRGAGR DLTEIRQLSI ASPSVQSVLE ESVSSTGILV EMGEEACRDC 60 RSWEEEIYWT HFQCLHFSQV LRPSFRRQLP IPEHFTKNLR KKLPQVMTLR GPSGLTWQVV 120 LTTNDDTMFF NHGWEEFVND HFLQEKDLLI FKYNGDSCFD VLIFDGQSLC EKAGSYFVRK 180 CGHREHDSGY HTKRKTGENS FEAPLPCPED VVGFSPPQKS ANNDIDTTPL GRPNIYRCTT 240 KKTRREIEFT NPIQEEFSTS DEEIETKPDM EHVSPSVVHS VPYLSSRRLI TEEEKQNVCQ 300 LAQAVLTRDG FMVVMKPTHV YRRFYMSIPS AWTSKNLRSL EKQDVILRTK ENTWHTKFYY 360 QKSKNSGGLS SGWKSFALAN DLQEFDVCVF EPGSPVNDAI VLDVNIFRVF PED

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MQKIIVGRNG DGTNSRGAGR DLTEIRQLSI ASPSVQSVLE ESVSSTGILV EMGEEACRDC  60
RSWEEEIYWT HFQCLHFSQV LRPSFRRQLP IPEHFTKNLR KKLPQVMTLR GPSGLTWQVV  120
LTTNDDTMFF NHGWEEFVND HFLQEKDLLI FKYNGDSCFD VLIFDGQSLC EKAGSYFVRK  180
CGHREHDSGY HTKRKTGENS FEAPLPCPED VVGFSPPQKS ANNDIDTTPL GRPNIYRCTT  240
KKTRREIEFT NPIQEEFSTS DEEIETKPDM EHVSPSVVHS VPYLSSRRLI TEEEKQNVCQ  300
LAQAVLTRDG FMVVMKPTHV YRRFYMSIPS AWTSKNLRSL EKQDVILRTK ENTWHTKFYY  360
QKSKNSGGLS SGWKSFALAN DLQEFDVCVF EPGSPVNDAI VLDVNIFRVF PED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	7e-85	B3 family protein