PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021683406.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 605aa    MW: 67589.1 Da    PI: 9.0202
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021683406.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.6e-1817106198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ff ++  s++l+ +rl +p  f+++++   + s  ++l+ +sg++W v l  ++ ++ ++l  GW  Fvk++ ++ gD +vF++dg+ +f  +v+
  XP_021683406.1  17 FFEIF--SSNLTADRLKIPVGFTNHMER--RISGSVSLTGPSGNVWPVDL--TQEKNDIFLDHGWPTFVKDHLIECGDLLVFRYDGELSF--TVQ 103
                     56666..999************955553..46778***************..999999**************************997777..899 PP

                     EE- CS
              B3  96 vfr 98 
                     vf+
  XP_021683406.1 104 VFD 106
                     987 PP
2B3443.8e-142803581394
                     TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     s  l +p +f ++h   ++++++++l++ +g  W+v+    ++   ++++ +GW  Fv++n++k gD+++F+l+++ e   +v
  XP_021683406.1 280 SYTLNIPYQFSTAHL--PNCKTEIVLRTVKGACWTVNSVPtTRVHTSHTFCGGWMAFVRSNDIKIGDVCIFELVRKCEL--RV 358
                     55799******9996..45899***************954566666799999********************9985444..44 PP
3B350.63.4e-165145931496
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       l +p +f +++   ++++++++l +++g++W+v+   + k+++ +++ +GW  Fv++n++k gD+++F+l+++   e++v++
  XP_021683406.1 514 YTLKIPHQFSAAYL--PNCKTEMVLLNLRGERWTVNSVPDSKGRTiHTFCGGWMAFVRDNDIKMGDVCIFELVSK--CEMLVHI 593
                     5699******9996..45899****************6655555579************************9873..3356666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    
MAKENHAEME NARRPCFFEI FSSNLTADRL KIPVGFTNHM ERRISGSVSL TGPSGNVWPV  60
DLTQEKNDIF LDHGWPTFVK DHLIECGDLL VFRYDGELSF TVQVFDISSC EKEAAFHSKC  120
SLDPNQYYRN RSTRQKRERE EKAASLDKSC ENVSKKVRGD SSELYSEHIN KNLGAGVVSN  180
KEGCQHEELI TTTKFQEESS SHEQCLSPCP ISFIPFQSKA CYVKPAEAAI QKRIGKEGEK  240
QPDRGYGSIL SEREKRVAES FISCFPYFVR IMKRFNISGS YTLNIPYQFS TAHLPNCKTE  300
IVLRTVKGAC WTVNSVPTTR VHTSHTFCGG WMAFVRSNDI KIGDVCIFEL VRKCELRVFI  360
LRVGKEVLDN QSGNLASNGV SVGCTATSHK TECFPKKSRK NTLKAHSWLT TKLEKCDKKG  420
SNKSQLAAVS RRKRGNATKG SARAMLCSQS RGGNEKLEVA TDSGKNLDVE LSLNDGAGGR  480
MMVALNEEKA AKSFNSGFPN FARIMRKFNI SGSYTLKIPH QFSAAYLPNC KTEMVLLNLR  540
GERWTVNSVP DSKGRTIHTF CGGWMAFVRD NDIKMGDVCI FELVSKCEML VHISGVGGKA  600
LQPPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-25B3 family protein