PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021683409.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 604aa    MW: 67518 Da    PI: 9.0202
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021683409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.6e-1817106198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ff ++  s++l+ +rl +p  f+++++   + s  ++l+ +sg++W v l  ++ ++ ++l  GW  Fvk++ ++ gD +vF++dg+ +f  +v+
  XP_021683409.1  17 FFEIF--SSNLTADRLKIPVGFTNHMER--RISGSVSLTGPSGNVWPVDL--TQEKNDIFLDHGWPTFVKDHLIECGDLLVFRYDGELSF--TVQ 103
                     56666..999************955553..46778***************..999999**************************997777..899 PP

                     EE- CS
              B3  96 vfr 98 
                     vf+
  XP_021683409.1 104 VFD 106
                     987 PP
2B3443.8e-142793571394
                     TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     s  l +p +f ++h   ++++++++l++ +g  W+v+    ++   ++++ +GW  Fv++n++k gD+++F+l+++ e   +v
  XP_021683409.1 279 SYTLNIPYQFSTAHL--PNCKTEIVLRTVKGACWTVNSVPtTRVHTSHTFCGGWMAFVRSNDIKIGDVCIFELVRKCEL--RV 357
                     55799******9996..45899***************954566666799999********************9985444..44 PP
3B350.63.4e-165135921496
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       l +p +f +++   ++++++++l +++g++W+v+   + k+++ +++ +GW  Fv++n++k gD+++F+l+++   e++v++
  XP_021683409.1 513 YTLKIPHQFSAAYL--PNCKTEMVLLNLRGERWTVNSVPDSKGRTiHTFCGGWMAFVRDNDIKMGDVCIFELVSK--CEMLVHI 592
                     5699******9996..45899****************6655555579************************9873..3356666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    
MAKENHAEME NARRPCFFEI FSSNLTADRL KIPVGFTNHM ERRISGSVSL TGPSGNVWPV  60
DLTQEKNDIF LDHGWPTFVK DHLIECGDLL VFRYDGELSF TVQVFDISSC EKEAAFHSKC  120
SLDPNQYYRN RSTRQKRERE EKAASLDKSC ENVSKKVRGD SSELYSEHIN KNLGAGVVSN  180
KEGCQHEELI TTTKFQEESS SHEQCLSPCP ISFIPFQSKA CYVKPEAAIQ KRIGKEGEKQ  240
PDRGYGSILS EREKRVAESF ISCFPYFVRI MKRFNISGSY TLNIPYQFST AHLPNCKTEI  300
VLRTVKGACW TVNSVPTTRV HTSHTFCGGW MAFVRSNDIK IGDVCIFELV RKCELRVFIL  360
RVGKEVLDNQ SGNLASNGVS VGCTATSHKT ECFPKKSRKN TLKAHSWLTT KLEKCDKKGS  420
NKSQLAAVSR RKRGNATKGS ARAMLCSQSR GGNEKLEVAT DSGKNLDVEL SLNDGAGGRM  480
MVALNEEKAA KSFNSGFPNF ARIMRKFNIS GSYTLKIPHQ FSAAYLPNCK TEMVLLNLRG  540
ERWTVNSVPD SKGRTIHTFC GGWMAFVRDN DIKMGDVCIF ELVSKCEMLV HISGVGGKAL  600
QPPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-25B3 family protein