PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021683712.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 215aa    MW: 23665.5 Da    PI: 5.1406
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021683712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.42.9e-3971071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+apyf  +q + +f +vhk+FGasnv+kll +lp + r+da+ ++ yeA ar+rdP+yG+v++i++lqqq+++l++e+
  XP_021683712.1   7 SCGACKFLRRKCTSECVFAPYFSYDQaATHFLAVHKVFGASNVSKLLLHLPVQSRSDAAITISYEALARMRDPIYGCVAHIFALQQQIASLQEEI 101
                     6***********************99789****************************************************************** PP

          DUF260  95 allkee 100
                     + l+++
  XP_021683712.1 102 EILGHQ 107
                     *99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MTGPGSSCGA CKFLRRKCTS ECVFAPYFSY DQAATHFLAV HKVFGASNVS KLLLHLPVQS  60
RSDAAITISY EALARMRDPI YGCVAHIFAL QQQIASLQEE IEILGHQMAN LTVGIASHGS  120
SQTTSNPNCE IQICSFQDAI NMQYYQNLPA AQVNNSGYAT GNQSFNSQVN VQLPSLYEWE  180
DLNPFCESHP NPLDRLLEGV DFPYCSWLDS GNNAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.11e-60LBD family protein