PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683783.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 373aa MW: 42188.9 Da PI: 6.6426

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.9	3.3e-15	73	132	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++ +e Aa ++ a++k++g XP_021683783.1 73 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDNEEAAAHTYDLAALKYWG 132 57*****************777799977447***********************98 PP
2	AP2	53.3	6.7e-17	175	227	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++++grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g+ XP_021683783.1 175 SKYRGVARHHQNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDMAAIEYRGA 227 89**************99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MKRSPDLSRF SSSSSSSYSS SASSCCLGSD TPLHHHLLRS QKPKSKRARR IQKNQDKCQI 60 NATATSSSRR RSSIYRGVTR HRWTGRFEAH LWDKSSWNNI QNKKGRQVYL GAYDNEEAAA 120 HTYDLAALKY WGPDTTLNFP IKSYSKELEE MQKMSKEEYL AYLRRRSSGF SRGVSKYRGV 180 ARHHQNGRWE ARIGRVFGNK YLYLGTYNTQ EEAAAAYDMA AIEYRGANAV TNFDTSNYID 240 RLKMKDVPLS HILPTDPLSN HSIESEEAAE PDVEQSPSPS SPLPPQEEQQ ATSPKLHCEL 300 PSCMDTSTMI VMEPIEEHEL NWSFCLDSGL TPLPVPDLPL ENACELTNLF DDTGFEDNID 360 LIFDGCCFGN DGN

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MKRSPDLSRF SSSSSSSYSS SASSCCLGSD TPLHHHLLRS QKPKSKRARR IQKNQDKCQI  60
NATATSSSRR RSSIYRGVTR HRWTGRFEAH LWDKSSWNNI QNKKGRQVYL GAYDNEEAAA  120
HTYDLAALKY WGPDTTLNFP IKSYSKELEE MQKMSKEEYL AYLRRRSSGF SRGVSKYRGV  180
ARHHQNGRWE ARIGRVFGNK YLYLGTYNTQ EEAAAAYDMA AIEYRGANAV TNFDTSNYID  240
RLKMKDVPLS HILPTDPLSN HSIESEEAAE PDVEQSPSPS SPLPPQEEQQ ATSPKLHCEL  300
PSCMDTSTMI VMEPIEEHEL NWSFCLDSGL TPLPVPDLPL ENACELTNLF DDTGFEDNID  360
LIFDGCCFGN DGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-110	AP2 family protein