PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683791.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 470aa MW: 51646 Da PI: 9.4081

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	67	89	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_021683791.1 67 FICEICNKGFQRDQNLQLHRRGH 89 89*******************88 PP
2	zf-C2H2	10.9	0.0014	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C k + +s+ k H +t+ XP_021683791.1 143 WKCEKCLKKYAVQSDWKAHSKTC 165 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MQMMSGDSFS IPSSIPGFAH QEQNANPNPK PNSYHEPKKK RNLPGTCDPD AEVIALSPKT 60 LMATNRFICE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRTN KEVRKKVYLC PEKTCVHHDP 120 SRALGDLTGI KKHYSRKHGE KKWKCEKCLK KYAVQSDWKA HSKTCGTREY KCDCGTLFSR 180 KDSFITHRAF CDALAEESAR INSTAATNLN FRNDTVNLPH YGVPGHGGQD ISGISQLSSS 240 GFRPDFSGLP SLSAYQQKTG LSLWLNQAIS EISPADNVAN HSNVYASSSS TGLPEMMQIG 300 SNLYVSSSTA NFGNLTLSGL PHGLKEGGGG GSNMGPDNMM DSLPSLYSDN HQNKKLKPTA 360 PMSATALLQK AAQMDSIRSN QSFLGSNIYG LMSSSSSSNT SNLNTLNHNR NEQLHQVFQN 420 VNKQPAESNL AVTNNSVATE DTIMVVSSGL HQVVMQYTGK QNDQPVQLKL

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MQMMSGDSFS IPSSIPGFAH QEQNANPNPK PNSYHEPKKK RNLPGTCDPD AEVIALSPKT  60
LMATNRFICE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRTN KEVRKKVYLC PEKTCVHHDP  120
SRALGDLTGI KKHYSRKHGE KKWKCEKCLK KYAVQSDWKA HSKTCGTREY KCDCGTLFSR  180
KDSFITHRAF CDALAEESAR INSTAATNLN FRNDTVNLPH YGVPGHGGQD ISGISQLSSS  240
GFRPDFSGLP SLSAYQQKTG LSLWLNQAIS EISPADNVAN HSNVYASSSS TGLPEMMQIG  300
SNLYVSSSTA NFGNLTLSGL PHGLKEGGGG GSNMGPDNMM DSLPSLYSDN HQNKKLKPTA  360
PMSATALLQK AAQMDSIRSN QSFLGSNIYG LMSSSSSSNT SNLNTLNHNR NEQLHQVFQN  420
VNKQPAESNL AVTNNSVATE DTIMVVSSGL HQVVMQYTGK QNDQPVQLKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	106	KLKQRTNKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-107	C2H2 family protein