PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021683826.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 201aa    MW: 23185.2 Da    PI: 8.0498
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021683826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF76.91.5e-24958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien   rqvtf+kRr+g lKKA+ELSvLCdae+ v ifs +gklye +
  XP_021683826.1  9 KRIENLVHRQVTFCKRRAGFLKKAKELSVLCDAEIGVFIFSAHGKLYELA 58
                    79*********************************************965 PP
2K-box61.24.1e-21911731799
           K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                       +e++ Lkkeie Lq+  R llG   e++++ eL  Le++Le  + +iRs+K+e+l+++i+ l+ ke+ l+++n++L+ k+e
  XP_021683826.1  91 AIEEINMLKKEIEILQKGVRYLLGGRSEEMTMDELLILEKNLEIWICHIRSTKMEILFKEIQLLRSKEEILKDANQYLKDKIE 173
                     5689*****************************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MARGKVQIKR IENLVHRQVT FCKRRAGFLK KAKELSVLCD AEIGVFIFSA HGKLYELATK  60
GSMQGLIERY MKTTGGSLQP GLSKETQPLD AIEEINMLKK EIEILQKGVR YLLGGRSEEM  120
TMDELLILEK NLEIWICHIR STKMEILFKE IQLLRSKEEI LKDANQYLKD KIEDTVEISN  180
FAPMTTNTPY PLTIQNEIFE F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.16e-78MIKC_MADS family protein