PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683956.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 705aa MW: 78732.9 Da PI: 6.3658

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.9	1.8e-18	561	657	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +kvl++sdv+++gr+vlpkk ae h +++ + ++ + +ed ++ W++++++ ++ks++y+l+ ++ +Fv+ ngL+egDf+v++ld ++++ XP_021683956.1 561 QKVLKQSDVGNLGRIVLPKKEAEIHlpELEARDGISIAMEDiGTSCIWNMRYRFwpNNKSRMYLLE-NTGDFVRTNGLQEGDFIVIYLDV-KCGK 653 79******************999999999******7777***99777777777777.******************865.7887 PP .EEE CS B3 92 lvvk 95 ++++ XP_021683956.1 654 YLIR 657 7765 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MDAMEEEQAI AGEDREIWLD REQDDLLDVN DSSIFHGDFP PLPDFPCMSS SSSSSSTPAL 60 VKPMASSSSS SSASSSSSAA SWAVLKSDAE EIDKKNYDHH QYHHNNHHGQ HDPVEAPTTA 120 LSSTASMEIP QPYDQGIAGV GCKDEMEIFG YMDLIEDNDF FDPSSIFQSD EHLLDEFQHE 180 QNMQPEQEPQ QENEELIMQT KIEEIQQQGN ASDDLAMVFL EWLKSNKETV SAEDLRKVKI 240 KKATIECAAR QLGGGKEAMK QFLKLILEWV QTNHLQKRRM KESSPDNIPH QCKDPLQNPN 300 PTASSNPNLI CNSIQPDQSA YCFTQSPWIA PPPYVSDPGT FMPGFSPMVG YMGDPFVSGA 360 SNMAGHSYPP GPPSDYHMLD SAQSWPATQF ALASPYTSFP DKNLQPVQAH PPILTGYGNQ 420 CPCQYLPGQV GDRLMRLGSS ATKEARKKRM ARQRRFLSHH RNHNSHNAQG NQHHQNQCAD 480 HHARFGNDNV APTTQPNHGN WVYWPAAGAV STTPVLPMDV QPVHNVDRPA MQAHQSNHQR 540 QVASDRRPGW KPEKNLKFLL QKVLKQSDVG NLGRIVLPKK EAEIHLPELE ARDGISIAME 600 DIGTSCIWNM RYRFWPNNKS RMYLLENTGD FVRTNGLQEG DFIVIYLDVK CGKYLIRGVK 660 VRQPGSKSEK KKSGKSQKNL HANYAAAASV NVSLSSPMNQ GQTVK

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MDAMEEEQAI AGEDREIWLD REQDDLLDVN DSSIFHGDFP PLPDFPCMSS SSSSSSTPAL  60
VKPMASSSSS SSASSSSSAA SWAVLKSDAE EIDKKNYDHH QYHHNNHHGQ HDPVEAPTTA  120
LSSTASMEIP QPYDQGIAGV GCKDEMEIFG YMDLIEDNDF FDPSSIFQSD EHLLDEFQHE  180
QNMQPEQEPQ QENEELIMQT KIEEIQQQGN ASDDLAMVFL EWLKSNKETV SAEDLRKVKI  240
KKATIECAAR QLGGGKEAMK QFLKLILEWV QTNHLQKRRM KESSPDNIPH QCKDPLQNPN  300
PTASSNPNLI CNSIQPDQSA YCFTQSPWIA PPPYVSDPGT FMPGFSPMVG YMGDPFVSGA  360
SNMAGHSYPP GPPSDYHMLD SAQSWPATQF ALASPYTSFP DKNLQPVQAH PPILTGYGNQ  420
CPCQYLPGQV GDRLMRLGSS ATKEARKKRM ARQRRFLSHH RNHNSHNAQG NQHHQNQCAD  480
HHARFGNDNV APTTQPNHGN WVYWPAAGAV STTPVLPMDV QPVHNVDRPA MQAHQSNHQR  540
QVASDRRPGW KPEKNLKFLL QKVLKQSDVG NLGRIVLPKK EAEIHLPELE ARDGISIAME  600
DIGTSCIWNM RYRFWPNNKS RMYLLENTGD FVRTNGLQEG DFIVIYLDVK CGKYLIRGVK  660
VRQPGSKSEK KKSGKSQKNL HANYAAAASV NVSLSSPMNQ GQTVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-165	B3 family protein