PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021684018.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 277aa    MW: 32099.2 Da    PI: 7.2221
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021684018.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.99.6e-18956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd ll + v+++G g+W++++++ g++R++k+c++rw++yl
   XP_021684018.1  9 KGAWTSEEDNLLRNWVERHGEGRWHLVPSRAGLNRCRKSCRLRWLNYL 56
                     79********************************************97 PP
2Myb_DNA-binding41.53.2e-1362105146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg + ++E +l ++++k+lG++ W++I+ +++ gRt++++k++w++
   XP_021684018.1  62 RGEFAEDEVDLMIKLHKLLGNR-WSLISGRLP-GRTANDIKNFWNT 105
                      789999****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEGPKGVRKG AWTSEEDNLL RNWVERHGEG RWHLVPSRAG LNRCRKSCRL RWLNYLKPNI  60
NRGEFAEDEV DLMIKLHKLL GNRWSLISGR LPGRTANDIK NFWNTRMRKN ITYCEEDAKP  120
KTPNAKKTNI IRPQPWKFKN MSSTTVNNAQ MKLLPEPHGS NTHQNVRMVH GGGVAPADNS  180
LCEHSMAFPL PRSYNEDVCE KILDKKEINQ FNGSATKPFA EENATGTDAV DTFFEEGQMT  240
KGMNDFYEED WWIEFSSHID LWKLLNEEQE TSIDEMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.16e-59MYB family protein