PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021684044.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YC

Protein Properties

Length: 254aa MW: 28214.7 Da PI: 6.0819

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021684044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	175.3	6e-55	72	175	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql+sfw++q ++k++dfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl XP_021684044.1 72 QLQSFWANQyqeVDKVADFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 166 89****9888899**************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_021684044.1 167 VDIVPREDL 175 ****987 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MDQQGRGEPP AIGIVSTSGQ VPYGTNPYQP NQMSSAQNPG SVGTIQSTGK PAEAQLAQNQ 60 LAYQQIHHQQ QQLQSFWANQ YQEVDKVADF KNHSLPLARI KKIMKADEDV RMISAEAPVV 120 FARACEMFIL ELTLRSWNHT EENKRRTLQK NDIAAAITRT DIFDFLVDIV PREDLKDEVL 180 ASISRGSMPV GGPADALSYG YMPHQHAAQV GTPGMIMGKP VMDPAIYTQQ SHAFMTQQMW 240 PQQGSEQQQA PSDH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	151	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	7e-84	NF-YC family protein