PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021684190.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 242aa MW: 27872.6 Da PI: 7.8533

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021684190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.8	1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_021684190.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	99.3	5.7e-33	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++++s++qe+ kLk+++e Lqr+qR+l GedL++L+ keLqqLeqqL+ lkkiRs+K++++l+q++elq+ke+ l ++n+aLrkklee XP_021684190.1 82 QSVHDTQSCYQEYLKLKAKVEVLQRSQRNLHGEDLGDLDTKELQQLEQQLDFTLKKIRSTKTQIMLDQLSELQRKEELLLQTNNALRKKLEE 173 456678***********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST 60 SSMAKTIEKY QRCSYAPLAD NQSVHDTQSC YQEYLKLKAK VEVLQRSQRN LHGEDLGDLD 120 TKELQQLEQQ LDFTLKKIRS TKTQIMLDQL SELQRKEELL LQTNNALRKK LEETDATLQS 180 SWEAREQSTV QYDRQPAHPD GLVDPLQCNR NLRIGFNAGE TDQVTVATTE QNVDGFLPGW 240 ML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-100	MIKC_MADS family protein