PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021684192.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 215aa    MW: 25310.2 Da    PI: 9.9851
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021684192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.72.4e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  XP_021684192.1  9 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYST 59
                    79***********************************************96 PP
2K-box107.51.5e-35781744100
           K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     ++ ++++   +e+++ e+++Lk+++e Lqr++Rh++Ged++sLslkeLq+LeqqL+++lk+iR +Kn+l++e+i+elqkkek++qe+n +L k++
  XP_021684192.1  78 RQLTATDLISQENWTLEYNRLKAKVELLQRNHRHYMGEDIDSLSLKELQNLEQQLDTALKHIRIRKNQLMYESISELQKKEKAIQEQNSMLAKQI 172
                     555555666789**********************************************************************************9 PP

           K-box  99 ee 100
                     +e
  XP_021684192.1 173 KE 174
                     87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYSTD  60
SCMEKILERY ERYSYAERQL TATDLISQEN WTLEYNRLKA KVELLQRNHR HYMGEDIDSL  120
SLKELQNLEQ QLDTALKHIR IRKNQLMYES ISELQKKEKA IQEQNSMLAK QIKEKEKAVA  180
QQVLWEQHNH GTNMSPFLLP QPPLPCLNIG KKHQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-111MIKC_MADS family protein