PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021684484.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 330aa    MW: 37379.6 Da    PI: 6.17
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021684484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF534.3e-1750881250
                    HHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF 12 tfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    +f kR+ +++KKA+EL +LC++ev+v+ fs++gk+  ++
  XP_021684484.1 50 SFDKRKPTLMKKAFELQTLCGVEVCVVCFSPDGKVDVWP 88
                    89*********************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MDLSQENPRQ GIKKRGRKAK KVLLVDGKEP RKANFIKKII NGDKPTQAKS FDKRKPTLMK  60
KAFELQTLCG VEVCVVCFSP DGKVDVWPEE PIRVKDLILK YKGFGKNEKK ESNCLDFLES  120
MRMKLENKKK KMIKEKIDRL ISGLSKQLDS LSGDSLMDSV NELEAKIKSF KEKIELLRTE  180
EEKGKAIQAD KQLIINTQSS LLDSTSDLID QDFYQKWQWN GFTNSDTITP NYGSCSDFPD  240
PDLFIQENFD LLSGIFSTEN PVNHLEASDN NIILNNDIPF GFPQENSSPD NAQEKFGMVK  300
GENYSSSSSS NYNGFLSEAL PISVWAPQPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65330.16e-13M-type_MADS family protein