PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021684524.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 237aa MW: 25776.3 Da PI: 8.4763

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021684524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	129.9	1.1e-40	41	140	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++pe++r d+++slv+eA+ r+rdPvyG++g i+ lqqq+++l+ae++ XP_021684524.1 41 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPESQRADTANSLVFEANLRLRDPVYGCMGAISVLQQQIQSLQAEIN 135 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_021684524.1 136 SVRAE 140 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MSRDRDRFDE IGKKIRRDTD LSSQMGRRHI LIPGILNTVT PCAACKLLRR RCAEECPFSP 60 YFSPHEPQKF AAVHKVFGAS NVSKMLMEVP ESQRADTANS LVFEANLRLR DPVYGCMGAI 120 SVLQQQIQSL QAEINSVRAE IIKYKYREAN TNIISSTEHH HPAALVSSGD LSSISAPAPQ 180 PLPPLSSPPP PPPPPPPTTA SIVVSSSSSS SISSLYTPPT SSTGYSSISS VNVPYFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	8e-73	LBD family protein