PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021684552.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 219aa MW: 25270.7 Da PI: 8.469

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021684552.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.5	1.3e-07	59	94	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l++ ++ +G +Rt+k+c++rw++yl XP_021684552.1 59 KGPWTMEEDLILINHIANHGL------------KRTGKSCRLRWLNYL 94 79****************4............59*********97 PP
2	Myb_DNA-binding	58.5	1.5e-18	100	143	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l++++++++G++ W++Ia++++ gRt++++k++w++ XP_021684552.1 100 RGNITPEEQQLIIELHAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 143 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MTITHQTKFY PRIAFIKPTA TFNISLSLSL SRSLSLSLSL QENKMDKKPC DSQEAEVRKG 60 PWTMEEDLIL INHIANHGLK RTGKSCRLRW LNYLRPDVRR GNITPEEQQL IIELHAKWGN 120 RWSKIAKHLP GRTDNEIKNY WRTRIQKHIK REEALSGQSS EINEHASTSM QVSGMIETYS 180 PPSYQETVEA FPGATLAPES YDNCWSIEDL WSMQLLNGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	3e-71	MYB family protein