PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021684712.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 255aa    MW: 28975.8 Da    PI: 6.7881
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021684712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.44e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien   rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e+ss
  XP_021684712.1  9 KRIENANSRQVTFSKRRAGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSS 59
                    79***********************************************96 PP
2K-box70.94e-24811729100
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     +e + +++ ++e++ Lk+ei +Lq +  +llG+dL+ LslkeLq+Leq+L+++l  +++kK++ll+eq+e+++ +e+++  en++Lr+++ee
  XP_021684712.1  81 VECEAEKQDSREVDVLKEEIAKLQAKELRLLGQDLTGLSLKELQHLEQKLNEGLLCVKEKKEHLLMEQLEQSRVQEQRAMLENETLRRQVEE 172
                     5556678899*******************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KAQELAILCD AEVAVIIFSN TGKLFEFSSS  60
GMKRTLSRYN KCLDSPEPTR VECEAEKQDS REVDVLKEEI AKLQAKELRL LGQDLTGLSL  120
KELQHLEQKL NEGLLCVKEK KEHLLMEQLE QSRVQEQRAM LENETLRRQV EELRGFFPST  180
DHSVPTYLEY YSIDRKHSFV NNGSASPDTA YNCSMEKGDS DTTLHLGLPT DAYRKRKAPE  240
GESHSNDSGS QLVLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.11e-93MIKC_MADS family protein