PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021684731.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 193aa MW: 22212.4 Da PI: 8.8825

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021684731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	52.5	8.5e-17	19	71	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++ +++l++Le+ F+ n++++ae + +LA +lgL+ rqV +W+qN+Ra++k XP_021684731.1 19 KKRLARDELQILETSFNANQKLKAELKLKLACQLGLPPRQVAIWYQNKRARHK 71 5567899********************************************98 PP
2	HD-ZIP_I/II	86.5	3.5e-28	19	109	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 k+rl+++ +++LE+sF++++kL+ e K +la +Lgl prqva+W+qn+RAR+k E++++ +++++ ++ +en rL+kev++L+ el++ XP_021684731.1 19 KKRLARDELQILETSFNANQKLKAELKLKLACQLGLPPRQVAIWYQNKRARHKIEAKEHQFKNIQQELGNVLAENIRLDKEVRTLKYELNK 109 99************************************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MSHFHQSKTP SHYYPRPSKK RLARDELQIL ETSFNANQKL KAELKLKLAC QLGLPPRQVA 60 IWYQNKRARH KIEAKEHQFK NIQQELGNVL AENIRLDKEV RTLKYELNKA QEMLVLASTP 120 PMMTLLSGST SDDDHANTHS PGNMKCWLDP CKFPGEEQNT YLTGPLDMLE MYTNNQDLLA 180 ESVKPNHGTN CRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	2e-16	HD-ZIP family protein