PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021684898.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 250aa MW: 28786.5 Da PI: 5.1498

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021684898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	130.6	6.4e-41	13	112	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k+l++ ++++am+++++++++ra+dPv G++++i++lq+q+e +kael+ XP_021684898.1 13 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLNQPDKDEAMRTIIFQSDVRANDPVGGCYRIIRELQRQIEYHKAELD 107 7*********************************************************************************************9 PP DUF260 96 llkee 100 l+ ++ XP_021684898.1 108 LVLHQ 112 98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MSITRIGNGT AQACAACKYQ RRKCAPDCIL APYFPHDRQR QFLNAHKLFG VSNITKIIKN 60 LNQPDKDEAM RTIIFQSDVR ANDPVGGCYR IIRELQRQIE YHKAELDLVL HQLAICRAQA 120 QQQTHFQMLE TNDSTTLGCE ILNPDSLDIY DPTMIQYHYP QTQEEEQEIV VQDHNQKLQE 180 DVNEALHIQN STDHVVSSSS LPSMHDLKQP FVNEFDNDIK PLLDINDVKF EPEELVERKF 240 VPLTQLVISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	2e-65	LBD family protein