PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021685012.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family NF-YA
Protein Properties Length: 330aa    MW: 36812.8 Da    PI: 10.5585
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021685012.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.91.5e-32181237158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RR++Rakle+++kl  ksrkpylheSRh hAl+R RgsgGrF
  XP_021685012.1 181 DGPIYVNAKQYHGILRRRKSRAKLEAQNKL-VKSRKPYLHESRHLHALNRVRGSGGRF 237
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MWVIRKGREN DKKPKTKKKK QAEVEKKWWW WVASVFILFG IITPVGFLVG LVTAKHRTRL  60
AERETESERE RFSWRVSREE TCLSSSQQLN SLLLLDLPDP KGQDEGCGNG AEGRMKPVFL  120
FSTPEIALNT SQTDDSHSMA RAPFPNADNY FSGLFTPYGP QAIMVGMTTA RVPLPLDLAD  180
DGPIYVNAKQ YHGILRRRKS RAKLEAQNKL VKSRKPYLHE SRHLHALNRV RGSGGRFLST  240
KRLQQSNPTS TGNVHVIPDT IQLHQRNETS ELESYRSRIG QSGTSSTCSG ITNVSSGAAI  300
FRQADHRFSS LATHMGGSMQ TSGGLVCSGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1521RKGRENDKKPKTKKKKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.11e-43NF-YA family protein