PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021685023.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 766aa    MW: 84651.3 Da    PI: 6.8473
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021685023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.42.8e-19101156156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+  q+k+WFqN+R+++k
  XP_021685023.1 101 KKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQMK 156
                     688999***********************************************999 PP
2START221.62.5e-692905101206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++elv++a+ +ep+W++s      ++n++e++++f+++ +     ++ ea+r+++vv+m++ +lve l+d++ qW++ +     +a+tl
  XP_021685023.1 290 ELAVAAMEELVRMAQMGEPLWMSSLdgtnAILNEEEYIRIFPRGIGpkpisFKCEASRETAVVIMNHINLVEYLMDVN-QWSTIFSgivsRAMTL 383
                     57899**********************999*************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+ae+q+++plvp R++++vRy++q+ ag+w++vdvS+d+ ++ p  +s+ R   +pSg+li++++ng+skvtwvehv
  XP_021685023.1 384 EVLSTGvagncnGALQVMTAEFQLPTPLVPtRESYYVRYCKQHAAGTWAVVDVSLDNLRPSP-AASCRR---RPSGCLIQEMPNGYSKVTWVEHV 474
                     *************************************************************9.566555...*********************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wvatl+rqce+
  XP_021685023.1 475 EVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCER 510
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 766 aa     Download sequence    
MLAIRNINLP FEAKWFWILA KRVKYFALCH RTNTRRERKK YKIIVPNMME DQLHHLDMTQ  60
NISESDLARI RDHEFDSTNT KSGSDNHDGA SGDDQDPRPK KKRYHRHTQR QIQEMEAFFK  120
ECPHPDDKQR KELSRELGLE PLQIKFWFQN KRTQMKTQHE RHENSQLRAE NDKLRADNMT  180
YREALSNASC PSCGGPTAIG EMSFDEHQLR LENARLREEI DRISAIAAKY VGKPVVNYPL  240
LSAPMPPRPL ELGVGNFGAQ PGMGGEMYGA GDLLRSIGAH SEADKPMIIE LAVAAMEELV  300
RMAQMGEPLW MSSLDGTNAI LNEEEYIRIF PRGIGPKPIS FKCEASRETA VVIMNHINLV  360
EYLMDVNQWS TIFSGIVSRA MTLEVLSTGV AGNCNGALQV MTAEFQLPTP LVPTRESYYV  420
RYCKQHAAGT WAVVDVSLDN LRPSPAASCR RRPSGCLIQE MPNGYSKVTW VEHVEVDDRG  480
VHNLYKQLVS SGHAFGAKRW VATLDRQCER LASAMATNIP SGDIGEGRKS MLKLAERMAI  540
SFFGGVSAST AHTWTTLSGT GADDVRVTTR KSVDDPGRPP GIVLSAATSF WLPVPPKRVF  600
DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL RVNSANSSQS NMLILQESCT  660
DQTASFVIYA PVDTVAMNVL LNGGDPDYMA LLPSGFAILP DGTTTTHGGG IGELGSAGGS  720
LLTVAFQILV DSVPTAKLSL GSVATVNNLI ACTVERIKAA LSCESI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein