PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021685140.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 343aa MW: 38453.5 Da PI: 6.2429

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021685140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++++G+ +W+t ++ g+ R++k+c++rw +yl XP_021685140.1 14 KGPWTPEEDHKLITYIQLHGPCNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.2	6.9e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ +G++ W++Ia++++ gRt++++k++w+++ XP_021685140.1 67 RGRFSFEEEETIIQLHSIMGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGRAPCCDKN GIKKGPWTPE EDHKLITYIQ LHGPCNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSIMGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRNG 120 IDPVTHAPRL DLLDLSSILG SALCSPPLFN LSSLLGTQAI LNPEMLRLAT TLSSLKQENQ 180 EIFLQHLQDN QLLSSLVQNE VSLSQANQFQ NPVQEPTSSP FLCPTQLMQT DVEGLSCQNS 240 LQNLVPSSWN DCLVSKAPNF VSCNTNPTVP DKLAENSGFQ PINNSCQNYS IESVLSTPLS 300 SPAPLNSSST FVNSSSTEDE RESYCSSLFK FEIPEILDMN DFL

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGRAPCCDKN GIKKGPWTPE EDHKLITYIQ LHGPCNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSIMGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRNG  120
IDPVTHAPRL DLLDLSSILG SALCSPPLFN LSSLLGTQAI LNPEMLRLAT TLSSLKQENQ  180
EIFLQHLQDN QLLSSLVQNE VSLSQANQFQ NPVQEPTSSP FLCPTQLMQT DVEGLSCQNS  240
LQNLVPSSWN DCLVSKAPNF VSCNTNPTVP DKLAENSGFQ PINNSCQNYS IESVLSTPLS  300
SPAPLNSSST FVNSSSTEDE RESYCSSLFK FEIPEILDMN DFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	5e-97	MYB family protein