PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021685492.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 347aa MW: 37956.7 Da PI: 6.632

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021685492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.1	4.5e-36	20	116	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssaseceaesss 79 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++ + +a+ss+ XP_021685492.1 20 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELppwhplanntngtmeadQ-------NAGSSE 107 79**************************************************************776666544333222221.......112222 PP TCP 80 ssasnsssg 88 + +++s++ XP_021685492.1 108 MAIAEQSES 116 222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MKGAGGEIVQ VQGGHIVRST GRKDRHSKVY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD 60 RPSKAVDWLI KKAKSAIDKL AELPPWHPLA NNTNGTMEAD QNAGSSEMAI AEQSESSGYS 120 FQLHRHLADN PSNGSSFITP SIDPDAIPDT MKSLFPTSST TSSMNFQGYP PDIISRTTNH 180 TEDLGLSLHC FQDQGLIRGQ SQADTSHAPS NDQNLFAGSA PVGYEANFQR MVAWSNNTST 240 ENRTDGGFAF NSPQMPPPQT LLGQDQAFSQ RGPLQSSFAQ SIRAWNDLTM ASADHHRTQE 300 IHQSFIFGSR FASEGLPGFS IPTRIHGEEE QSIVSDKPSS SSPNSQH

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MKGAGGEIVQ VQGGHIVRST GRKDRHSKVY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD  60
RPSKAVDWLI KKAKSAIDKL AELPPWHPLA NNTNGTMEAD QNAGSSEMAI AEQSESSGYS  120
FQLHRHLADN PSNGSSFITP SIDPDAIPDT MKSLFPTSST TSSMNFQGYP PDIISRTTNH  180
TEDLGLSLHC FQDQGLIRGQ SQADTSHAPS NDQNLFAGSA PVGYEANFQR MVAWSNNTST  240
ENRTDGGFAF NSPQMPPPQT LLGQDQAFSQ RGPLQSSFAQ SIRAWNDLTM ASADHHRTQE  300
IHQSFIFGSR FASEGLPGFS IPTRIHGEEE QSIVSDKPSS SSPNSQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-81	TCP family protein