PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021685533.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 26332.9 Da    PI: 9.666
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021685533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.77.5e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien +nrqvt+skRrng++KKA EL vLCda+v++i+fs+tgk++e++s
  XP_021685533.1  9 KRIENPTNRQVTYSKRRNGLFKKARELTVLCDAKVSLIMFSNTGKFHEFIS 59
                    79***********************************************86 PP
2K-box91.41.6e-3071168198
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yqk+ g +l+++++e++q++l+kL++++++L+re+R+++GedL++Ls+ eL+ Leq++ ++l+ +R++K++++++q+++ +kk k+l+e++ +L 
  XP_021685533.1  71 YQKALGIDLWKTHYERMQEHLRKLREKNNKLRREIRQRMGEDLNDLSMDELHGLEQRMASALEVVRERKYHVIKTQTDTHKKKVKNLEERHGDLV 165
                     78899999***********************************************************************************9997 PP

           K-box  96 kkl 98 
                      ++
  XP_021685533.1 166 LEY 168
                     665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGRGKIEIKR IENPTNRQVT YSKRRNGLFK KARELTVLCD AKVSLIMFSN TGKFHEFISP  60
TTTTKNVFDQ YQKALGIDLW KTHYERMQEH LRKLREKNNK LRREIRQRMG EDLNDLSMDE  120
LHGLEQRMAS ALEVVRERKY HVIKTQTDTH KKKVKNLEER HGDLVLEYEA KCEDPHCGLV  180
DNDGDYESAI ALANAASNLY AFRLHHGHLG TNLHHGGGFG SHELRLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.18e-69MIKC_MADS family protein