PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021685534.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 221aa    MW: 25565 Da    PI: 9.3109
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021685534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.77.2e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien +nrqvt+skRrng++KKA EL vLCda+v++i+fs+tgk++e++s
  XP_021685534.1  9 KRIENPTNRQVTYSKRRNGLFKKARELTVLCDAKVSLIMFSNTGKFHEFIS 59
                    79***********************************************86 PP
2K-box66.97e-2371162198
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yqk+ g +l+++++e++q++l+kL++++++L+re+R+++GedL++Ls+ eL+ Leq++ ++l+      ++++++q+++ +kk k+l+e++ +L 
  XP_021685534.1  71 YQKALGIDLWKTHYERMQEHLRKLREKNNKLRREIRQRMGEDLNDLSMDELHGLEQRMASALE------YHVIKTQTDTHKKKVKNLEERHGDLV 159
                     78899999******************************************************7......9*********************9997 PP

           K-box  96 kkl 98 
                      ++
  XP_021685534.1 160 LEY 162
                     665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MGRGKIEIKR IENPTNRQVT YSKRRNGLFK KARELTVLCD AKVSLIMFSN TGKFHEFISP  60
TTTTKNVFDQ YQKALGIDLW KTHYERMQEH LRKLREKNNK LRREIRQRMG EDLNDLSMDE  120
LHGLEQRMAS ALEYHVIKTQ TDTHKKKVKN LEERHGDLVL EYEAKCEDPH CGLVDNDGDY  180
ESAIALANAA SNLYAFRLHH GHLGTNLHHG GGFGSHELRL A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.11e-62MIKC_MADS family protein