PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021685960.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family BBR-BPC
Protein Properties Length: 292aa    MW: 32566.4 Da    PI: 10.1258
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021685960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind353.25.7e-108142921301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mddd+ + rn+gyyep+  +k nlglqlmss+a+rd+k     r+ n  + ++++a+++rd         m++  rd+++++        ++k+l
  XP_021685960.1  14 MDDDALNMRNWGYYEPT--FKGNLGLQLMSSMADRDTKHflpgRDPNNIMVGPNGAFHPRDcvvsdasvpMNY-VRDSWISQ--------REKFL 97 
                     9***9999*******99..************************999999************************.9*******........789** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+ +         ++ vl++t+ ++s+q      l+++    r+e   +++ ie +++++ke ++ kkrq + +pk++kakk++k    +k++
  XP_021685960.1  98 NMLPPNP--------NYAVLPETSGAHSMQV-----LQPPNSS-RDE---KVPRIE-EPSVNKEGNQLKKRQGGGTPKTPKAKKPRK----PKDS 170
                     ***9555........4899**********99.....5554444.222...345554.477778888888899999999999999999....3333 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++++   +r+k  kks+d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+LekL
  XP_021685960.1 171 SNNAV--QRVKPAKKSMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKL 263
                     44444..689************************************************************************************* PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aaeGy++ np+DL++hWAkHGtnkfvtir
  XP_021685960.1 264 AAEGYNFVNPIDLRTHWAKHGTNKFVTIR 292
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MHIYVCTSSF SVFMDDDALN MRNWGYYEPT FKGNLGLQLM SSMADRDTKH FLPGRDPNNI  60
MVGPNGAFHP RDCVVSDASV PMNYVRDSWI SQREKFLNML PPNPNYAVLP ETSGAHSMQV  120
LQPPNSSRDE KVPRIEEPSV NKEGNQLKKR QGGGTPKTPK AKKPRKPKDS SNNAVQRVKP  180
AKKSMDVVIN GIDMDISGIP IPVCSCTGTP QQCYRWGCGG WQSACCTTNV SMYPLPMSTK  240
RRGARIAGRK MSQGAFKKVL EKLAAEGYNF VNPIDLRTHW AKHGTNKFVT IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-111BBR-BPC family protein