PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021685961.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family BBR-BPC
Protein Properties Length: 279aa    MW: 31063.6 Da    PI: 10.2417
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021685961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind353.44.8e-10812791301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mddd+ + rn+gyyep+  +k nlglqlmss+a+rd+k     r+ n  + ++++a+++rd         m++  rd+++++        ++k+l
  XP_021685961.1   1 MDDDALNMRNWGYYEPT--FKGNLGLQLMSSMADRDTKHflpgRDPNNIMVGPNGAFHPRDcvvsdasvpMNY-VRDSWISQ--------REKFL 84 
                     9***9999*******99..************************999999************************.9*******........789** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+ +         ++ vl++t+ ++s+q      l+++    r+e   +++ ie +++++ke ++ kkrq + +pk++kakk++k    +k++
  XP_021685961.1  85 NMLPPNP--------NYAVLPETSGAHSMQV-----LQPPNSS-RDE---KVPRIE-EPSVNKEGNQLKKRQGGGTPKTPKAKKPRK----PKDS 157
                     ***9555........4899**********99.....5554444.222...345554.477778888888899999999999999999....3333 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++++   +r+k  kks+d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+LekL
  XP_021685961.1 158 SNNAV--QRVKPAKKSMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKL 250
                     44444..689************************************************************************************* PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aaeGy++ np+DL++hWAkHGtnkfvtir
  XP_021685961.1 251 AAEGYNFVNPIDLRTHWAKHGTNKFVTIR 279
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDDDALNMRN WGYYEPTFKG NLGLQLMSSM ADRDTKHFLP GRDPNNIMVG PNGAFHPRDC  60
VVSDASVPMN YVRDSWISQR EKFLNMLPPN PNYAVLPETS GAHSMQVLQP PNSSRDEKVP  120
RIEEPSVNKE GNQLKKRQGG GTPKTPKAKK PRKPKDSSNN AVQRVKPAKK SMDVVINGID  180
MDISGIPIPV CSCTGTPQQC YRWGCGGWQS ACCTTNVSMY PLPMSTKRRG ARIAGRKMSQ  240
GAFKKVLEKL AAEGYNFVNP IDLRTHWAKH GTNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-111BBR-BPC family protein