PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686046.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 779aa MW: 87248.5 Da PI: 5.9896

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	1.9e-08	717	771	2	47
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 WT E+e l+++v+++ + Wk+I ++ gRt ++k++w++ XP_021686046.1 717 VHWTDKEEEMLKEGVQKFSKTderaiPWKKILEYGSsvflRGRTTVDLKDKWRNM 771 57***************99*********999**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
MYCCIYLINA APILPEHLGK STREMVSLRC LEHLFGNSNE VSNDVPSVTE PKHIFDFSGT 60 CEDVLKSILK ETSVSDLRTS GSDFSKWDIH RFIEHKRASI PKRALEKLKD AILKGTHPCA 120 ASLTELRGIL HKNDENDKIT VDSCHHNAVT GRIDIDDTNT QTMAPEGSSF SLPVENKNGM 180 VGGDSHHRNL LPFKRNKSYL DDENPAGEYQ EDQGGVGSGD LLLNVKRFKS NPTERIFIPR 240 NGKELVEDSS ERMVGVIEKG SCHMERESQV EGPGECRSLE NGHDKFVATE GLGRSCNASV 300 SAEIQHNQRE NADNAKKMPS DTSGDGPSQH ILMDEVHEAE HIELNGTCVR TLHKVSIHDA 360 KANSYCGYQL KSPSAVSLSG FHSDTPVDKL GGMEHVYEED TSSDGDEHHF SKVDVAMEKN 420 RFLSSQCTLN HVSPTNWTEL NLCVKCGKDG QFLVCNAVGC PLVVHKECLG SLPRFDEEGK 480 FYCPFCAYSL AISEYMEAKK RASLARKELS AFINKQTESS HSKEDSKLNH YGDEDPMSGN 540 FGDRESDKTN NGGYALRVNG QLKKRRGDKQ PVEPMVSCAD AKLMGQEEEP DATHAMIHVS 600 PGEKEREEMA PECLRGLDRE DQTFANPESS GDNPVSKNNE FFSLNEKQAE GLIQKDVLEQ 660 QSGDSFEKPV HAIEINQGDI SDERNEEKIT SNCSIRFRRR EAQYVYPAIP QLRRKKVHWT 720 DKEEEMLKEG VQKFSKTDER AIPWKKILEY GSSVFLRGRT TVDLKDKWRN MCKGSPKCK

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

MYCCIYLINA APILPEHLGK STREMVSLRC LEHLFGNSNE VSNDVPSVTE PKHIFDFSGT  60
CEDVLKSILK ETSVSDLRTS GSDFSKWDIH RFIEHKRASI PKRALEKLKD AILKGTHPCA  120
ASLTELRGIL HKNDENDKIT VDSCHHNAVT GRIDIDDTNT QTMAPEGSSF SLPVENKNGM  180
VGGDSHHRNL LPFKRNKSYL DDENPAGEYQ EDQGGVGSGD LLLNVKRFKS NPTERIFIPR  240
NGKELVEDSS ERMVGVIEKG SCHMERESQV EGPGECRSLE NGHDKFVATE GLGRSCNASV  300
SAEIQHNQRE NADNAKKMPS DTSGDGPSQH ILMDEVHEAE HIELNGTCVR TLHKVSIHDA  360
KANSYCGYQL KSPSAVSLSG FHSDTPVDKL GGMEHVYEED TSSDGDEHHF SKVDVAMEKN  420
RFLSSQCTLN HVSPTNWTEL NLCVKCGKDG QFLVCNAVGC PLVVHKECLG SLPRFDEEGK  480
FYCPFCAYSL AISEYMEAKK RASLARKELS AFINKQTESS HSKEDSKLNH YGDEDPMSGN  540
FGDRESDKTN NGGYALRVNG QLKKRRGDKQ PVEPMVSCAD AKLMGQEEEP DATHAMIHVS  600
PGEKEREEMA PECLRGLDRE DQTFANPESS GDNPVSKNNE FFSLNEKQAE GLIQKDVLEQ  660
QSGDSFEKPV HAIEINQGDI SDERNEEKIT SNCSIRFRRR EAQYVYPAIP QLRRKKVHWT  720
DKEEEMLKEG VQKFSKTDER AIPWKKILEY GSSVFLRGRT TVDLKDKWRN MCKGSPKCK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	698	716	RRREAQYVYPAIPQLRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	2e-08	MYB_related family protein