PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686048.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 676aa MW: 75984.5 Da PI: 6.1316

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.4	1.6e-08	614	668	2	47
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 WT E+e l+++v+++ + Wk+I ++ gRt ++k++w++ XP_021686048.1 614 VHWTDKEEEMLKEGVQKFSKTderaiPWKKILEYGSsvflRGRTTVDLKDKWRNM 668 57***************99*********999**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MGYTSFYRTQ KSFHSKTRIR KELRGILHKN DENDKITVDS CHHNAVTGRI DIDDTNTQTM 60 APEGSSFSLP VENKNGMVGG DSHHRNLLPF KRNKSYLDDE NPAGEYQEDQ GGVGSGDLLL 120 NVKRFKSNPT ERIFIPRNGK ELVEDSSERM VGVIEKGSCH MERESQVEGP GECRSLENGH 180 DKFVATEGLG RSCNASVSAE IQHNQRENAD NAKKMPSDTS GDGPSQHILM DEVHEAEHIE 240 LNGTCVRTLH KVSIHDAKAN SYCGYQLKSP SAVSLSGFHS DTPVDKLGGM EHVYEEDTSS 300 DGDEHHFSKV DVAMEKNRFL SSQCTLNHVS PTNWTELNLC VKCGKDGQFL VCNAVGCPLV 360 VHKECLGSLP RFDEEGKFYC PFCAYSLAIS EYMEAKKRAS LARKELSAFI NKQTESSHSK 420 EDSKLNHYGD EDPMSGNFGD RESDKTNNGG YALRVNGQLK KRRGDKQPVE PMVSCADAKL 480 MGQEEEPDAT HAMIHVSPGE KEREEMAPEC LRGLDREDQT FANPESSGDN PVSKNNEFFS 540 LNEKQAEGLI QKDVLEQQSG DSFEKPVHAI EINQGDISDE RNEEKITSNC SIRFRRREAQ 600 YVYPAIPQLR RKKVHWTDKE EEMLKEGVQK FSKTDERAIP WKKILEYGSS VFLRGRTTVD 660 LKDKWRNMCK GSPKCK

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MGYTSFYRTQ KSFHSKTRIR KELRGILHKN DENDKITVDS CHHNAVTGRI DIDDTNTQTM  60
APEGSSFSLP VENKNGMVGG DSHHRNLLPF KRNKSYLDDE NPAGEYQEDQ GGVGSGDLLL  120
NVKRFKSNPT ERIFIPRNGK ELVEDSSERM VGVIEKGSCH MERESQVEGP GECRSLENGH  180
DKFVATEGLG RSCNASVSAE IQHNQRENAD NAKKMPSDTS GDGPSQHILM DEVHEAEHIE  240
LNGTCVRTLH KVSIHDAKAN SYCGYQLKSP SAVSLSGFHS DTPVDKLGGM EHVYEEDTSS  300
DGDEHHFSKV DVAMEKNRFL SSQCTLNHVS PTNWTELNLC VKCGKDGQFL VCNAVGCPLV  360
VHKECLGSLP RFDEEGKFYC PFCAYSLAIS EYMEAKKRAS LARKELSAFI NKQTESSHSK  420
EDSKLNHYGD EDPMSGNFGD RESDKTNNGG YALRVNGQLK KRRGDKQPVE PMVSCADAKL  480
MGQEEEPDAT HAMIHVSPGE KEREEMAPEC LRGLDREDQT FANPESSGDN PVSKNNEFFS  540
LNEKQAEGLI QKDVLEQQSG DSFEKPVHAI EINQGDISDE RNEEKITSNC SIRFRRREAQ  600
YVYPAIPQLR RKKVHWTDKE EEMLKEGVQK FSKTDERAIP WKKILEYGSS VFLRGRTTVD  660
LKDKWRNMCK GSPKCK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	595	613	RRREAQYVYPAIPQLRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	2e-08	MYB_related family protein