PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686057.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 484aa MW: 55300.9 Da PI: 6.189

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.1	2.7e-24	111	210	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+++v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ ++ XP_021686057.1 111 KWTDSMVRLLIMAVFYIGDEAGSEGndptgkkkpgglsQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACKVVENQSL 205 7************99888876422556667777777******************************************559*****9 PP trihelix 82 fdqle 86 ++ ++ XP_021686057.1 206 LETMD 210 99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MEHNGLSGGI FSGMGSGMLG LEMPLHQQQN PQNPQNSHHL HHPQMVAYAH HDSDHHLQSQ 60 QQTLKHSYPY ASSTSREKPQ SPLSDEDEHG FTGDDSTSDG KRKVSPWQRM KWTDSMVRLL 120 IMAVFYIGDE AGSEGNDPTG KKKPGGLSQK KGKWKSVSRA MMEKGFYVSP QQCEDKFNDL 180 NKRYKRVNDI LGKGTACKVV ENQSLLETMD LSPKMKEEVK KLLNSKHLFF REMCAYHNSC 240 GHGSSGVASG TNHSPEVATD QSHSQHPQAS HGQQQRCSHS SENAQFMTNS RNETEGSKMA 300 KRVSNEEDDE EDDDESEEDE DDYDEDEDEA IDGNSRGQNG HGHEDEDEHE EKGSRKRRRT 360 GVFSLVSSLM QQLNTELASV VQDGARSTWE KKHWMKMRLM QLEEQQVSYQ CEAFELEKQR 420 LKWVKFSSKK EREMERAKLE NERRRLESER MVLLIHQKEL ELLDLHQQQQ LSSNKRSDPS 480 SITG

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MEHNGLSGGI FSGMGSGMLG LEMPLHQQQN PQNPQNSHHL HHPQMVAYAH HDSDHHLQSQ  60
QQTLKHSYPY ASSTSREKPQ SPLSDEDEHG FTGDDSTSDG KRKVSPWQRM KWTDSMVRLL  120
IMAVFYIGDE AGSEGNDPTG KKKPGGLSQK KGKWKSVSRA MMEKGFYVSP QQCEDKFNDL  180
NKRYKRVNDI LGKGTACKVV ENQSLLETMD LSPKMKEEVK KLLNSKHLFF REMCAYHNSC  240
GHGSSGVASG TNHSPEVATD QSHSQHPQAS HGQQQRCSHS SENAQFMTNS RNETEGSKMA  300
KRVSNEEDDE EDDDESEEDE DDYDEDEDEA IDGNSRGQNG HGHEDEDEHE EKGSRKRRRT  360
GVFSLVSSLM QQLNTELASV VQDGARSTWE KKHWMKMRLM QLEEQQVSYQ CEAFELEKQR  420
LKWVKFSSKK EREMERAKLE NERRRLESER MVLLIHQKEL ELLDLHQQQQ LSSNKRSDPS  480
SITG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	355	359	RKRRR
2	355	360	RKRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	2e-95	Trihelix family protein