PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686093.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 531aa MW: 58099.2 Da PI: 6.6873

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.8	2.8e-18	150	236	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a++e+ ++l+rg+l++ +Weev++ + r ++ +++ +qCk+k +nl+kryk ++++++++ s+s++p+f+++e XP_021686093.1 150 EWSDAAIECLLDAYTEKFTQLNRGNLRGRDWEEVAAIVseRCQKQTKTVEQCKNKVDNLKKRYKLERHRMSNG-GISVSHWPWFKKME 236 5***********************************666677789********************99.67778******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MASCDDDFSL IGDDNHHHTN PNDHHHHILH QPYAPHRFPV KSAPIHAPPQ PILPSPVAGS 60 AIGAKNLGGG VEEAEEAEED TETDSGFPEV NPFSDNSNPF NNETNVRADK RREGEDHSDG 120 ANSNPYSYKK ARPSGSAGNS SGEYRKDREE WSDAAIECLL DAYTEKFTQL NRGNLRGRDW 180 EEVAAIVSER CQKQTKTVEQ CKNKVDNLKK RYKLERHRMS NGGISVSHWP WFKKMEEIVG 240 NSLPIKIATD EYKTSGSSGT AARQSKRYAT TTACPVGQTN NIKSKSMCNA RWRRVVLKIS 300 GVALTGAGPN NIDPKVMVLI AREVAIACRL GVEVAIVVGG RNFFCGNTWV TETGSDRCIA 360 YQIGMMASVM NSILLQSALE KVGVQTRVQT AFAMQEVAEP YNRQRAIRHL EKGRVVIFGG 420 IGAGTGNPHF STDTAAALQA LEIHAEAVMK GTNVDGVYDC HSRDNNVTFE HICFRDLVSR 480 GATSMDMMAL TCCEENGIPV VIFNLLEPGN ISKALCGEQV GTLIDQTGSI N

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MASCDDDFSL IGDDNHHHTN PNDHHHHILH QPYAPHRFPV KSAPIHAPPQ PILPSPVAGS  60
AIGAKNLGGG VEEAEEAEED TETDSGFPEV NPFSDNSNPF NNETNVRADK RREGEDHSDG  120
ANSNPYSYKK ARPSGSAGNS SGEYRKDREE WSDAAIECLL DAYTEKFTQL NRGNLRGRDW  180
EEVAAIVSER CQKQTKTVEQ CKNKVDNLKK RYKLERHRMS NGGISVSHWP WFKKMEEIVG  240
NSLPIKIATD EYKTSGSSGT AARQSKRYAT TTACPVGQTN NIKSKSMCNA RWRRVVLKIS  300
GVALTGAGPN NIDPKVMVLI AREVAIACRL GVEVAIVVGG RNFFCGNTWV TETGSDRCIA  360
YQIGMMASVM NSILLQSALE KVGVQTRVQT AFAMQEVAEP YNRQRAIRHL EKGRVVIFGG  420
IGAGTGNPHF STDTAAALQA LEIHAEAVMK GTNVDGVYDC HSRDNNVTFE HICFRDLVSR  480
GATSMDMMAL TCCEENGIPV VIFNLLEPGN ISKALCGEQV GTLIDQTGSI N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein