PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021686170.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 211aa    MW: 24270.6 Da    PI: 9.7833
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021686170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.31e-181561147
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                    krien+  r + fskRr gi KKA+EL +LC+aev v++fs+ gk +
  XP_021686170.1 15 KRIENEDDRLIAFSKRRSGIYKKASELVTLCGAEVGVLVFSPAGKPF 61
                    79*****************************************9855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MAGKQTKGRQ KITMKRIENE DDRLIAFSKR RSGIYKKASE LVTLCGAEVG VLVFSPAGKP  60
FSFGQPSIES MANRFLENPP PKDNTYPLVE AHRKMRIDEL NQQYSEMLSQ LEAEKERGNM  120
LKQMMIRGKG RRQQQQQQQS YWWEAPVDEL NFQELHQMNF VLEELHSNLC RKINGPLSSR  180
NPIFASNNAN LQNDPAASSF PHGCGYGRRY F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-42M-type_MADS family protein