PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686196.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 332aa MW: 37646.6 Da PI: 7.2626

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.9	1.1e-18	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_021686196.1 34 RGPWTAEEDFKLINYIAAYGEGRWNSLARCAGLKRTGKSCRLRWLNYL 81 89********************************************97 PP
2	Myb_DNA-binding	49.4	1e-15	87	130	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++ +++++ ++G++ W++Ia++++ gRt++++k++w++ XP_021686196.1 87 RGNITLEEQLMILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 130 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MMDVKGRNSN HKNSSSSSSS STTQSEEEMG DLRRGPWTAE EDFKLINYIA AYGEGRWNSL 60 ARCAGLKRTG KSCRLRWLNY LRPDVRRGNI TLEEQLMILE LHSRWGNRWS KIAQHLPGRT 120 DNEIKNYWRT RVQKHAKQLK CDVNSKQFKD TMRYLWMPRL MERIQAANTT ATSTSTATAV 180 VPTIDGTITE ATHHHHLINS TITEATHHHH LINSTNTDMG SGQWAVAHVG SEFGVAHVTP 240 STYTTPETSS TAASSDSLRN QVSPNDYYGI SVNPDYFQSG QVGYSESMIS PSGYFNQVSD 300 FPAMEHNNNQ FWVDGGDTSY NLWNVEDIWF NM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06490.1	3e-87	MYB family protein