PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686198.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 843aa MW: 96653 Da PI: 7.3384

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.7	7.3e-27	85	187	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ e+ +r+ ++t+Cka+++vk++ dgkw+++++++ XP_021686198.1 85 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSfnrprarqnkqdPENGTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVK 179 5*****************************************999999998776555444555999*********************** PP FAR1 84 eHnHelap 91 eHnHel p XP_021686198.1 180 EHNHELLP 187 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 843 aa Download sequence
MDIDLRLPSG EHDKDNEEPN GIDNMLSEDK LHNGDVVTGN IVNVAEEVHA IEGGAMSSPT 60 AEFKEEANLE PLSGMEFESH GAAYSFYQEY ARSMGFNTAI QNSRRSKTSR EFIDAKFACS 120 RYGTKREYDK SFNRPRARQN KQDPENGTGR RSCSKTDCKA SMHVKRRPDG KWVIHSFVKE 180 HNHELLPAQA VSEQTRKMYA AMARQFAEYK NVIGLKNDPK NPFDKGRNLA LEAADAKILL 240 DFFTQMQSLN SNFFYAIELG EDLLLKNLFW VDAKSRHDYV NFCDVVSFDA TYVRNKYKMP 300 LTLFVGVNQH CQFMLLGCAL LSEESATTYS WLMRTWLRAM GGQAPKVIIT DQDKALKSVI 360 SEVFPNAHHY FFLWNMLGKV SENLSQVIKR HENFMAKFEK CIFRSWTNDE FVKRWLKILD 420 RFELRENDVM QSLFEDRELW VPIYMRDAIL AGMSTVLRSE SLNSYFDKYV HKKTTVQEFV 480 KQYEAILQDR YEEEAKADSD TWNKQPTLKS PSPLEKSVSG VYTHAVFKKF QVEVLGVTAC 540 HPKMESQDET SVSFRVQDLE KHQDFTVVWN QIRSEVACIC RLYEYKGYLC RHSLVVLQMC 600 QQSAIPSQYI LKRWTKDVKS RHFLGEESEQ VQSRVQRYND LCQRALKLSE EGSLSQESYN 660 IAFRALEEAF GNCISANNSS KTLAEAGTSA THGLLCIEED NQSRSMNKTN KKKNPTKKRK 720 VNSEQEVTTV GAEDSLQQMD KLRSRAVTLD GYYGAQPSVP GMVQLNLMAP RDNFYGNQQT 780 IQGLGQLNSI APSHDGYYNA QQSMHGMGQM DFFRTPTGFS YGIRQDDPNV RTAQLHDNAS 840 RHA

Sequence ? help Back to Top

Protein Sequence Length: 843 aa Download sequence

MDIDLRLPSG EHDKDNEEPN GIDNMLSEDK LHNGDVVTGN IVNVAEEVHA IEGGAMSSPT  60
AEFKEEANLE PLSGMEFESH GAAYSFYQEY ARSMGFNTAI QNSRRSKTSR EFIDAKFACS  120
RYGTKREYDK SFNRPRARQN KQDPENGTGR RSCSKTDCKA SMHVKRRPDG KWVIHSFVKE  180
HNHELLPAQA VSEQTRKMYA AMARQFAEYK NVIGLKNDPK NPFDKGRNLA LEAADAKILL  240
DFFTQMQSLN SNFFYAIELG EDLLLKNLFW VDAKSRHDYV NFCDVVSFDA TYVRNKYKMP  300
LTLFVGVNQH CQFMLLGCAL LSEESATTYS WLMRTWLRAM GGQAPKVIIT DQDKALKSVI  360
SEVFPNAHHY FFLWNMLGKV SENLSQVIKR HENFMAKFEK CIFRSWTNDE FVKRWLKILD  420
RFELRENDVM QSLFEDRELW VPIYMRDAIL AGMSTVLRSE SLNSYFDKYV HKKTTVQEFV  480
KQYEAILQDR YEEEAKADSD TWNKQPTLKS PSPLEKSVSG VYTHAVFKKF QVEVLGVTAC  540
HPKMESQDET SVSFRVQDLE KHQDFTVVWN QIRSEVACIC RLYEYKGYLC RHSLVVLQMC  600
QQSAIPSQYI LKRWTKDVKS RHFLGEESEQ VQSRVQRYND LCQRALKLSE EGSLSQESYN  660
IAFRALEEAF GNCISANNSS KTLAEAGTSA THGLLCIEED NQSRSMNKTN KKKNPTKKRK  720
VNSEQEVTTV GAEDSLQQMD KLRSRAVTLD GYYGAQPSVP GMVQLNLMAP RDNFYGNQQT  780
IQGLGQLNSI APSHDGYYNA QQSMHGMGQM DFFRTPTGFS YGIRQDDPNV RTAQLHDNAS  840
RHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein