PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686233.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 233aa MW: 26896.2 Da PI: 9.6905

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686233.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.1	3e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_021686233.1 9 KRIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59 79***********************************************96 PP
2	K-box	73.9	4.7e-25	85	173	9	97
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++++ ++++++ L k+ie L+ ++ +llG++Le++s+ eLqqLe+qLe+sl++iR++Kn+l++e+ie+l++ ek l eenk+L++k XP_021686233.1 85 TSQENLQNMKEDTFSLAKKIELLEVSKLKLLGDGLEPCSIDELQQLESQLERSLTRIRTRKNQLFTEKIEKLREEEKILMEENKRLQAK 173 68899*********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MVRGKTQMKR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSC 60 RFFSINKTIE RYQKKAKDLG ISIKTSQENL QNMKEDTFSL AKKIELLEVS KLKLLGDGLE 120 PCSIDELQQL ESQLERSLTR IRTRKNQLFT EKIEKLREEE KILMEENKRL QAKCGLQPMD 180 LSTTTIKEQH VADRQSMEVE TELFIGPQIA NRKNMEVGTE LFIGPPETRT SFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22950.1	7e-64	MIKC_MADS family protein