PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686248.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 215aa MW: 24794.7 Da PI: 9.6498

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.1	5.7e-29	10	58	2	50
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gkl e++ XP_021686248.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLCEFA 58 8***********************************************8 PP
2	K-box	83.8	3.7e-28	79	170	6	97
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++ +++++++l++e++++ k+ie L+ +R+llGe+L+s++++eLqq+eqqLe+s++++R++Kn++++eqie+l++kek l en +L +k XP_021686248.1 79 SRKISDENMQQLKTEATNMVKNIELLEIAKRKLLGECLGSCTIEELQQIEQQLERSVSNVRARKNQVFKEQIERLKEKEKLLAAENARLCEK 170 334899*********************************************************************************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLCEFANS 60 RMQATIERYR KHVKDTQISR KISDENMQQL KTEATNMVKN IELLEIAKRK LLGECLGSCT 120 IEELQQIEQQ LERSVSNVRA RKNQVFKEQI ERLKEKEKLL AAENARLCEK CGVQPWQSLK 180 VVGETRLCEE SSPVSDVETE LFIGPPETRT QRLLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	2e-80	MIKC_MADS family protein