PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686251.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 247aa MW: 27929.4 Da PI: 8.4636

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.1	1.7e-31	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gk+ye+ XP_021686251.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKVYEFG 58 79**********************************************95 PP
2	K-box	76.8	5.6e-26	80	175	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqi.....eelqkkekelqeenkaLrkkl 98 e++++s++qe++kLk+++e+Lq +qRhllGedL++Ls+keLq+Le+qLe +l R++K +l+ +i +ke+ l + nk+L+ kl XP_021686251.1 80 SVERETQSWYQEATKLKAKYESLQLTQRHLLGEDLGPLSVKELQNLEKQLEVALALARQRKVDLYSLSIxppmiXFALEKERHLGDLNKQLKFKL 174 456789********************************************************999876511111567788888888888888777 PP K-box 99 e 99 e XP_021686251.1 175 E 175 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKVYEFGSA 60 GTTKTLERYQ RCCFTPQDNS VERETQSWYQ EATKLKAKYE SLQLTQRHLL GEDLGPLSVK 120 ELQNLEKQLE VALALARQRK VDLYSLSIXP PMIXFALEKE RHLGDLNKQL KFKLEAEGQS 180 LAIQDLWNCG AADGNSNFAL HASQSNPLDC DPGPVLQIGY HHFVQAEGSS VPRSMASETN 240 FMQGWVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	1e-101	MIKC_MADS family protein