PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686338.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 222aa MW: 25976.4 Da PI: 8.8375

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2.1e-19	61	114	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++ql+ Le+ F+++ +++ +++ +L+++lgL+ rq+ vWFqNrRa++k XP_021686338.1 61 KKKRLTSDQLDSLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWK 114 56679************************************************9 PP
2	HD-ZIP_I/II	117.8	6.2e-38	60	151	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+++q+ +LE+sF+ee kL+p+rK++l+reLglqprq+avWFqnrRAR+k+kqlE+ y+aLk+++d ++ e+++L++ev +L++ l+ XP_021686338.1 60 EKKKRLTSDQLDSLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKQLERLYDALKQEFDVVSVEKQKLQEEVMKLKAILR 151 69*************************************************************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MDWHGNLRTF VSRPENSFNF LYNYRYDQYN QGMDLKHPAM AETPHGMVPT MDKLSFGIHE 60 KKKRLTSDQL DSLERSFQEE IKLDPDRKMK LSRELGLQPR QIAVWFQNRR ARWKAKQLER 120 LYDALKQEFD VVSVEKQKLQ EEVMKLKAIL REQATDRKPV STGYTEISGE ETVESTSVAI 180 RSSNGKPRGT SQHQIAECNY LLNVDEYNPV TSPYWAVLPS YP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	90	KKKRLTSDQLDSLERSFQEEIKLDPDRKMK
2	109	117	RRARWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	5e-58	HD-ZIP family protein