PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686418.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 214aa MW: 24446.5 Da PI: 5.8867

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.4	3.2e-20	80	140	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++++ ql++Le++Fe+ + +p++++++e++ +l ++e++V++WFqNrRa+ k+ XP_021686418.1 80 RQRWAPKPAQLDILESMFEQsSTTPDRQRIREITIQLaehgPISETNVYNWFQNRRARSKR 140 89***************99***************99***************97 PP
2	Wus_type_Homeobox	92.5	3.8e-30	79	142	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW+P+p Q+ iLe+++++ tP +++i++it +L+e+G i+++NV++WFQNr+aR+++kq XP_021686418.1 79 SRQRWAPKPAQLDILESMFEQSSTTPDRQRIREITIQLAEHGPISETNVYNWFQNRRARSKRKQ 142 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MGEEEQYQNG VLSDGLGVKV MTDEQMEMLR KQISVYATIC ESLVQMHKAI SAQQDSTGMR 60 LANPYNDPFS SYAFHKIPSR QRWAPKPAQL DILESMFEQS STTPDRQRIR EITIQLAEHG 120 PISETNVYNW FQNRRARSKR KQAALPPIPN HHDSAKDKKT KSDETQVDEN LALMLNHMYF 180 QSPDIGGIDQ LIGQTEVPMS YCSYLQVEQH DLSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	142	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-54	WOX family protein