PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021686554.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 237aa    MW: 27269.3 Da    PI: 9.4597
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021686554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.71.1e-312373151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey++
  XP_021686554.1 23 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYCN 73
                    79***********************************************95 PP
2K-box109.63.5e-36911883100
           K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +s+++s +e +a+++qqe+akL+++i++Lq+++Rhl+G++L+sL++keL+qLe++Le+++++iRskK+elll++ie+lqk+e el++e  +Lr+k
  XP_021686554.1  91 SSNTSSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVCLRTK 185
                     455566999************************************************************************************** PP

           K-box  98 lee 100
                     ++e
  XP_021686554.1 186 IAE 188
                     986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MAYIHLFYVS FEVGMGRGKI EIKRIENTTN RQVTFCKRRN GLLKKAYELS VLCDAEVALI  60
VFSSRGRLYE YCNNNSIKST IERYKKACSD SSNTSSITEI NAQYYQQESA KLRQQIQMLQ  120
NSNRHLMGDS LSSLTVKELK QLENRLERGI TRIRSKKHEL LLAEIEYLQK REIELENESV  180
CLRTKIAEIE RLQQANMVTG AELNAIQALT SRNFFGPHMI EGGTAYSHPD KKILHLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.11e-123MIKC_MADS family protein