PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686604.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 370aa MW: 40712.1 Da PI: 6.5168

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	191	245	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_021686604.1 191 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 245 778899***********************************************98 PP
2	HD-ZIP_I/II	127.6	5.4e-41	191	281	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk XP_021686604.1 191 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELR-ALK 281 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MELGLSLGDA SKPFGFVDKS RDITTNNRSS SSLGFCMALS IGPNPTNQQE LQLEQEQEHS 60 NDNSTDSATT TKIKTPTNLS LLDPPLIQLD LLPNTPVTRS NLHALPWPSS DNGSCEVASS 120 GNMARSGLDV NRLPAVEEAE DGAALSSSPP NSAASSFQMD FSIYSKNGNQ ETEVERASSR 180 ASDEDDNGNT RKKLRLSKEQ SAFLEESFKE HSTLNPKQKL ALAKQLNLRP RQVEVWFQNR 240 RARTKLKQTE VDCEYLKRCC ETLTEENRRL HKELQELRAL KTSNPFYMQL PATTLTMCPS 300 CERVATTTSA TVTTTTTTVT PSTTMKPTSN TTTNNNNNNS STEPTVTATG LSLARPGRFY 360 PFSHHQPTSS

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MELGLSLGDA SKPFGFVDKS RDITTNNRSS SSLGFCMALS IGPNPTNQQE LQLEQEQEHS  60
NDNSTDSATT TKIKTPTNLS LLDPPLIQLD LLPNTPVTRS NLHALPWPSS DNGSCEVASS  120
GNMARSGLDV NRLPAVEEAE DGAALSSSPP NSAASSFQMD FSIYSKNGNQ ETEVERASSR  180
ASDEDDNGNT RKKLRLSKEQ SAFLEESFKE HSTLNPKQKL ALAKQLNLRP RQVEVWFQNR  240
RARTKLKQTE VDCEYLKRCC ETLTEENRRL HKELQELRAL KTSNPFYMQL PATTLTMCPS  300
CERVATTTSA TVTTTTTTVT PSTTMKPTSN TTTNNNNNNS STEPTVTATG LSLARPGRFY  360
PFSHHQPTSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	196	TRKKLRL
2	240	248	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	6e-70	HD-ZIP family protein