PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686724.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 650aa MW: 71477.4 Da PI: 6.1881

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.8	3.5e-29	84	167	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m+ ++r+++ k+plWeevs+k++e g++rs+k+Ckek+en+ k++k+++eg+ ++ ++ +t+++fdql XP_021686724.1 84 RWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYNRSAKKCKEKFENVYKYHKRTREGRTGK--QEGKTYRFFDQLA 167 8******************************************************************96..45557****96 PP
2	trihelix	105.1	5e-33	467	552	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev aLi++r+ ++++++++ k+plWe++s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a XP_021686724.1 467 RWPKVEVEALIKLRTHLDSKYQENGPKGPLWEDISAGMRKLGYNRSAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 552 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MLGDSSSLLA TTTTAAVAGG GGGGVATAGG SSSDPPPAPS THQLPGGGGA HESSSEVGHV 60 GSNNSCEDDK GRGDEGDRSF GGNRWPRQET LALLKIRSDM DVAFRDASVK GPLWEEVSRK 120 LAELGYNRSA KKCKEKFENV YKYHKRTREG RTGKQEGKTY RFFDQLAAFE NHASFSLSSP 180 PPQQPQQVKP QTPAVTPQTP AVTTIAMPVV NPPALSVGAS PISTVPSTIT KATPVATTSM 240 SQGIVTTGIN LSIPSFPLTN PTILPSAQET TNPTINPSSF SNFSPDLLSN STSSSTSSDV 300 EIHGRHRKKR KWKDFFERIM KEVIHKQEDM QRKFLEAIEK REHDRMVREE SWRMQEMARI 360 NREREILAQE RSIAAAKDAA IMAFLQKLSD QQNPGQLQNN PPPPQAQQPP LAKPPPPPQP 420 PAPARAPTPH PITVVPMASA VTPQPAINLE TKSGNGDQSF TPASSSRWPK VEVEALIKLR 480 THLDSKYQEN GPKGPLWEDI SAGMRKLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPED 540 SKTCPYFHQL DALYKEKNKS DPSSNIEFKP ENSVPLMVRP EQQWPPPQQE HGPADDSVME 600 DLESDQDQQN HQDDDEKDDD DDDDEEEEED EAGGYEIVAN RPATMSSAAG

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MLGDSSSLLA TTTTAAVAGG GGGGVATAGG SSSDPPPAPS THQLPGGGGA HESSSEVGHV  60
GSNNSCEDDK GRGDEGDRSF GGNRWPRQET LALLKIRSDM DVAFRDASVK GPLWEEVSRK  120
LAELGYNRSA KKCKEKFENV YKYHKRTREG RTGKQEGKTY RFFDQLAAFE NHASFSLSSP  180
PPQQPQQVKP QTPAVTPQTP AVTTIAMPVV NPPALSVGAS PISTVPSTIT KATPVATTSM  240
SQGIVTTGIN LSIPSFPLTN PTILPSAQET TNPTINPSSF SNFSPDLLSN STSSSTSSDV  300
EIHGRHRKKR KWKDFFERIM KEVIHKQEDM QRKFLEAIEK REHDRMVREE SWRMQEMARI  360
NREREILAQE RSIAAAKDAA IMAFLQKLSD QQNPGQLQNN PPPPQAQQPP LAKPPPPPQP  420
PAPARAPTPH PITVVPMASA VTPQPAINLE TKSGNGDQSF TPASSSRWPK VEVEALIKLR  480
THLDSKYQEN GPKGPLWEDI SAGMRKLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPED  540
SKTCPYFHQL DALYKEKNKS DPSSNIEFKP ENSVPLMVRP EQQWPPPQQE HGPADDSVME  600
DLESDQDQQN HQDDDEKDDD DDDDEEEEED EAGGYEIVAN RPATMSSAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-152	Trihelix family protein