PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686835.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 530aa MW: 58873.9 Da PI: 7.9299

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.6	3.4e-19	52	98	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++lv av+++ ++Wk+Ia++++ Rt+ qc +rwqk+l XP_021686835.1 52 KGGWTEEEDKILVAAVEKFNCRNWKKIAECVP-DRTDVQCLHRWQKVL 98 688***************************.**********986 PP
2	Myb_DNA-binding	54.7	2.3e-17	104	150	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd l++d+v + G++ W+ Ia++++ gR +kqc++rw+++l XP_021686835.1 104 KGTWKKEEDALILDLVVKQGNKKWSEIAKHLP-GRIGKQCRERWYNHL 150 799***************************.***********97 PP
3	Myb_DNA-binding	49.2	1.2e-15	156	198	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+eE++ l++a+k +G++ W+ a+ + gRt++++k++w+ XP_021686835.1 156 RTAWTKEEELTLIKAHKIYGNK-WAELAKFLH-GRTENSIKNHWN 198 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MGEELGEALS DSEKGSLVSS CDPVHTTSAN NAVTNPISIK GRTTGPTRRS TKGGWTEEED 60 KILVAAVEKF NCRNWKKIAE CVPDRTDVQC LHRWQKVLNP DLVKGTWKKE EDALILDLVV 120 KQGNKKWSEI AKHLPGRIGK QCRERWYNHL NPEIKRTAWT KEEELTLIKA HKIYGNKWAE 180 LAKFLHGRTE NSIKNHWNCS MKKKLESCPA SEFDLYSYNT TAESRTFDVD NQSLNLVHSC 240 SLDLGLGNAT TRERQLSTSD KQNCKYPEIE STFGTMDARA LTAFYLTGVK CRKSDNNANT 300 NWSNKLINAS SDDVARLQSP ELSKTVNSLH SGALSVPLTL SLTTPIGVAG YDNKTGTLCG 360 SSSITYKFLS YESLQLKDGN ILLQNVSYSS TDSCIRTAGS PVSSCALANQ ISHNWGSPES 420 ILRSAASSFK STPSIIRKRS FKTSRQADNA THCDHVCKLE DNVENLSLHL CTCNKDGDNK 480 MDPSNEKQPF LSPAKSQKLE KCLEDAFNVE CHSDSERSRA FASHDSCGDN

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MGEELGEALS DSEKGSLVSS CDPVHTTSAN NAVTNPISIK GRTTGPTRRS TKGGWTEEED  60
KILVAAVEKF NCRNWKKIAE CVPDRTDVQC LHRWQKVLNP DLVKGTWKKE EDALILDLVV  120
KQGNKKWSEI AKHLPGRIGK QCRERWYNHL NPEIKRTAWT KEEELTLIKA HKIYGNKWAE  180
LAKFLHGRTE NSIKNHWNCS MKKKLESCPA SEFDLYSYNT TAESRTFDVD NQSLNLVHSC  240
SLDLGLGNAT TRERQLSTSD KQNCKYPEIE STFGTMDARA LTAFYLTGVK CRKSDNNANT  300
NWSNKLINAS SDDVARLQSP ELSKTVNSLH SGALSVPLTL SLTTPIGVAG YDNKTGTLCG  360
SSSITYKFLS YESLQLKDGN ILLQNVSYSS TDSCIRTAGS PVSSCALANQ ISHNWGSPES  420
ILRSAASSFK STPSIIRKRS FKTSRQADNA THCDHVCKLE DNVENLSLHL CTCNKDGDNK  480
MDPSNEKQPF LSPAKSQKLE KCLEDAFNVE CHSDSERSRA FASHDSCGDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	6e-88	MYB family protein